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29 August 2022: Database Analysis

Transcriptome Analysis of Peripheral Blood Mononuclear Cells Response in Patients with Severe COVID-19 Reveals Crucial Genes Regulating Protein Ubiquitination

Jinfeng Huang 1ABCDEF* , Ruobing Li 2EF* , Jie Cheng 3B* , Peilin Zhen 1AB*

DOI: 10.12659/MSM.937532

Med Sci Monit 2022; 28:e937532

Table 2 The molecular complex detection (MCODE) plug-in of Cytoscape was used to process the data downloaded from STRING; specific gene cluster data were exported and presented in a tabular form.

ClusterScoreNodesEdgesNode IDs
17828ANAPC1, TRIM21, ASB16, RNF130, FBXO11, UBE2J1, FBXO41, ITCH
24510RPS18, RPS28, WDR3, RPP21, UTP20
34510HCAR2, PCP2, TAS2R19, TAS2R31, TAS2R46
441021AGFG1, RAB3D, RAB3A, RAB22A, RABGGTA, FDPS, MVD, PMVK, IPP, MVK
5233ITGAL, SELPLG, SELP
61.66733TTC30B, DYNC2H1, TTC30A
7233CHMP2B, MVB12B, MVB12A
8233ACTR3C, ARPC1A, ARPC2
91.66744ABCB6, TAP1, SLC46A1, ABCB7

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Medical Science Monitor eISSN: 1643-3750
Medical Science Monitor eISSN: 1643-3750